I feel with you Dale B!

I had similar problems 2 months ago. Fortunately, wise from experience, I do external backup every hour so I didn't loose much work. But it took a week for me to have everything back in the right spot and running again. It felt as if I have billions of files nested everywhere on the 2 disks. Sigh... I am no expert.
Anyhow, I made an image of the whole thing so hopefully next time will be faster.