From what I've seen, it's mainly stuff from Japan that seems to be zipped in this way.  Maybe there's a reason I'm unaware of.

Anyhow, the simplest method of dealing with it, rather than placing everything manually, is to rezip the resulting "Runtime" folder, then unzip it.  All the stuff will then be placed in the correct locations.

Coppula eam se non posit acceptera jocularum.

My Store

My Gallery